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• Pre-processing
  • Introduction
  • Image acquisition
  • When to correct
  • Correction types
  • Atmospheric correction
  • Relative atmospheric correction
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• Field data collection
  • Introduction
  • Benthic sampling
  • Benthic field data sources
  • Evaluating field survey techniques
  • Georeferenced photo transects
  • Transects - photo analysis
  • Transect output
  • Transects - required equipment
  • Snorkel vs AUV surveys
  • Examples
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  • AUV example with validation
  • Spectral libraries
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  • Optical water properties
  • Bathymetry
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• Mapping approaches
  • Introduction
  • Manual delineation
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• Change and trends
  • Introduction
  • About
  • Image requirements
  • Mapping change
  • Trend detection
  • Example time series
  • Variations in coastal water clarity
  • Variations in benthic-microalgae mats
  • Variations in Sargassum cover
  • Changes due to cyclone impact
  • Example change maps
  • Seagrass example
  • Sea surface temperature example
  • Coral bleaching example
  • Cyclone, coral bleaching, and coral recovery
• Delivery
  • Introduction
  • Post classification
  • Refinements and smoothing operations
  • Stratification and post-classification sorting
  • Error assessment
  • Sampling design
  • Sampling unit size
  • Number of samples
  • Sampling scheme
  • Selecting a reference data set
  • Reference data example
  • Derivation of error or contingency matrix
  • Category level accuracy
  • Map level accuracy
  • Quantitative image products
  • Interpreting mapping accuracy
  • Interpreting mapping accuracy
  • Interpreting mapping accuracy
  • Interpreting mapping accuracy
  • Final map creation

Borrego-Acevedo, R., C. M. Roelfsema, S. R. Phinn and A. R. Grinham (2014). "Predicting Distribution of Microphytobenthos Abundance on a Reef Platform by Combining in Situ Underwater Spectrometry and Pigment Analysis." Remote Sensing Letters, pp: 461-470. doi:10.1080/2150704X.2014.922723